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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XPOT, exportin, tRNA
Sequence ID:NM_007235
Entrez Gene ID:11260
Ensembl ID:ENSG00000184575

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 64803815 - 64841911

 Exon Info From UCSC:
NM_007235

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4420052Full LengthBC020569exportin, tRNA (nuclear export receptor for tRNAs)
3447259IncompleteBC000950exportin, tRNA (nuclear export receptor for tRNAs)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009166  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007235 NP_009166 O43592 Xpo1

Related Sequences

 
mRNAGenPeptSwissProt
AF039022 AAC39793 O43592
BC000950 AAH00950 O43592
BC020569 AAH20569 O43592
AK292884 BAF85573 A8KA19
Y16414 CAA76202 O43592

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XPOT NP_009166 M.musculus Xpot 73192 Gene Info NP_001074525 96
A.thaliana PSD 843588   NP_001077813 29
S.pombe los1 2541311   NP_596516 29
C.elegans xpo-3 177581   NP_501320 28
N.crassa NCU11169 3872342   XP_956187 28
S.cerevisiae LOS1 853630   NP_012717 23

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)