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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ZFP36L1, Zinc finger protein 36, C3H type-like 1
Sequence ID:NM_004926
NM_001244701
NM_001244698
Entrez Gene ID:677
Ensembl ID:ENSG00000185650

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q22-q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 69255321 - 69261453

Transcript StartTranscript EndChromosomal Start Chromosomal End
128356925437469257208
283630226925959869259784

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3860353Full LengthBC018340zinc finger protein 36, C3H type-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004917  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001244698 NP_001231627    
NM_001244701 NP_001231630    
NM_004926 NP_004917 Q07352 zf-CCCH
Tis11B_N

Related Sequences

 
mRNAGenPeptSwissProt
BC018340 AAH18340 Q07352
BT019468 AAV38275 Q07352
DQ891349 ABM82275  
DQ894529 ABM85455  
AK024202 BAG51270 B3KNA8
AK294363 BAG57626 B4DG15
AK303917 BAG64845 B4E1N3
X79066
X79067
CAA55670 Q07352
X99404 CAA67781 Q07352

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZFP36L1 NP_004917 M.musculus Zfp36l1 12192 Gene Info NP_031590 99
R.norvegicus Zfp36l1 29344   NP_058868 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)