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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IDO1, indoleamine 2,3-dioxygenase 1
Sequence ID:NM_002164
RefSeqGene ID:NG_028155
Entrez Gene ID:3620
Ensembl ID:ENSG00000131203

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p12-p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 39771346 - 39785704

NM_002164 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12013977132739771527
2022973977539339775488
2984173977560639775725
4185363977633339776451
5375513977761839777632
5526513978007039780169
6527693978098739781104
7708213978223939782290
8229703978274139782889
97115673978534839785944

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5208340Full LengthBC027882indoleamine 2,3-dioxygenase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002155  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002164 NP_002155 P14902 EC 1.13.11.52 IDO

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M34455 AAA36081 P14902 EC 1.13.11.52
BC027882 AAH27882 P14902 EC 1.13.11.52
AY221100 AAO34405 P14902 EC 1.13.11.52
HQ447286 ADQ31773    
JF772862 AEF30540 F6M9T7  
AK313259 BAG36069 P14902 EC 1.13.11.52
X17668 CAA35663 P14902 EC 1.13.11.52

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IDO1 NP_002155 R.norvegicus Ido1 66029   NP_076463 64
M.musculus Ido1 15930 Gene Info NP_032350 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)