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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDK4, pyruvate dehydrogenase kinase, isozyme 4
Sequence ID:NM_002612
Entrez Gene ID:5166
Ensembl ID:ENSG00000004799

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 95212808 - 95214614

 Exon Info From UCSC:
NM_002612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3047987Full LengthBC040239pyruvate dehydrogenase kinase, isozyme 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002603  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002612 NP_002603 Q16654 EC 2.7.11.2 HATPase_c

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U54617 AAC50669 Q16654 EC 2.7.11.2
BC040239 AAH40239 Q16654 EC 2.7.11.2
DQ891256 ABM82182    
DQ894441 ABM85367    
AK223328 BAD97048 Q53FG1  
AK312424 BAG35334 A4D1H4  
AK096428 BAG53287 B3KU25  
AK098151 BAG53583 B3KUX1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDK4 NP_002603 M.musculus Pdk4 27273 Gene Info NP_038771 93
R.norvegicus Pdk4 89813   NP_446003 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)