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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SELE, selectin E
Sequence ID:NM_000450
RefSeqGene ID:NG_012124
Entrez Gene ID:6401
Ensembl ID:ENSG00000007908

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPERTENSIONADD1
AGT
AGTR1
AGTR1
ATP1B1
ATP1B1
CYP3A5
ECE1
GNB3
NOS2
NOS3
PTGIS
RGS5
RGS5

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22-q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 169694884 - 169703220

 Exon Info From UCSC:
NM_000450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40085183Full LengthBC131551selectin E
40148214Full LengthBC142677selectin E
40148829Full LengthBC142711selectin E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000441  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000450 NP_000441 P16581 EGF
Lectin_C
Sushi
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
M24736 AAA52376 P16581
M30640 AAA52377 P16581
BC131551 AAI31552 P16581
BC142677 AAI42678 P16581
BC142711 AAI42712 P16581
AY367062 AAQ67702 Q6ULR7
AK314214 BAG36888 B2RAJ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SELE NP_000441 M.musculus Sele 20339 Gene Info NP_035475 73
R.norvegicus Sele 25544   NP_620234 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta