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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CETN2, Centrin, EF-hand protein, 2
Sequence ID:NM_004344
RefSeqGene ID:NG_009163
Entrez Gene ID:1069
Ensembl ID:ENSG00000147400

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 151996384 - 151999296

NM_004344 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
10611151995872151996473
612749151997080151997217
750878151997692151997820
8791037151998145151998303
10381087151999251151999300

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3836808Full LengthBC013873centrin, EF-hand protein, 2
3961448Full LengthBC005334centrin, EF-hand protein, 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004335  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004344 NP_004335 P41208 efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC005334 AAH05334 P41208
BC013873 AAH13873 P41208
BT007256 AAP35920 P41208
AK311940 BAG34881 P41208
X72964 CAA51467 P41208
AM393039 CAL37917  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CETN2 NP_004335 R.norvegicus Cetn2 84593   XP_215222 97
M.musculus Cetn2 26370 Gene Info NP_062278 96
A.gambiae AgaP_AGAP009260 1280223   XP_320052 81
P.falciparum PfCEN1 813206   XP_001351001 74
D.melanogaster CG17493 3355126   NP_001036396 72
A.thaliana CEN2 824198   NP_190605 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)