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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GPD1L, glycerol-3-phosphate dehydrogenase 1-like
Sequence ID:NM_015141
RefSeqGene ID:NG_023375
Entrez Gene ID:23171
Ensembl ID:ENSG00000152642

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 32181753 - 32210201

NM_015141 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12483214800232148249
2494263216956732169744
4275673218007832180218
5687063218171932181857
7078193218811332188225
82010533220036732200600
105411603220105932201165
116140613220730532210205

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4820730Full LengthBC028726glycerol-3-phosphate dehydrogenase 1-like
3960207IncompleteBC006168glycerol-3-phosphate dehydrogenase 1-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055956  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_015141 NP_055956 Q8N335 EC 1.1.1.8 NAD_Gly3P_dh_N
NAD_Gly3P_dh_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC006168 AAH06168 Q8N335 EC 1.1.1.8
BC028726 AAH28726 Q8N335 EC 1.1.1.8
D42047 BAA07648 Q8N335 EC 1.1.1.8
AK292808 BAF85497 Q8N335 EC 1.1.1.8
AK125404 BAG54194 B3KWN2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPD1L NP_055956 M.musculus Gpd1l 333433 Gene Info NP_780589 95
R.norvegicus Gpd1l 363159   XP_343499 95
P.falciparum PF11_0157 810704   XP_001347828 50
P.falciparum PFL0780w 811209   XP_001350565 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)