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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEC24C, SEC24 family, member C (S. cerevisiae)
Sequence ID:NM_004922
NM_198597
Entrez Gene ID:9632
Ensembl ID:ENSG00000176986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 75526565 - 75531917

 Exon Info From UCSC:
NM_004922
NM_198597

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4123623Full LengthBC018928SEC24 family, member C (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004913  NP_940999  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004922 NP_004913 P53992 Gelsolin
zf-Sec23_Sec24
Sec23_trunk
Sec23_helical
Sec23_BS
NM_198597 NP_940999   Gelsolin
zf-Sec23_Sec24
Sec23_trunk
Sec23_helical
Sec23_BS

Related Sequences

 
mRNAGenPeptSwissProt
BC018928 AAH18928 P53992
JF432326 ADZ15543  
D38555 BAA07558 P53992
AK126671 BAC86637 Q6ZTF3
AK298598 BAG60784 B4DQ22
AK299826 BAG61695 B4DSN3
AK303085 BAG64196 B4DZT4
AK316451 BAH14822 B7ZAY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEC24C NP_004913 M.musculus Sec24c 218811 Gene Info NP_766184 93
R.norvegicus Sec24c 685144   NP_001102926 92
D.melanogaster gho 33409   NP_608664 50
C.elegans sec-24.1 178078   NP_502178 44
S.pombe SPBC4.03c 2540710   NP_595476 34
N.crassa NCU06868 3874224   XP_958077 34
S.cerevisiae SFB3 856498   NP_011966 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)