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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ACADSB, acyl-CoA dehydrogenase, short/branched chain
Sequence ID:NM_001609
RefSeqGene ID:NG_008003
Entrez Gene ID:36
Ensembl ID:ENSG00000196177

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 124768494 - 124813635

 Exon Info From UCSC:
NM_001609

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4706281Full LengthBC013756acyl-Coenzyme A dehydrogenase, short/branched chain
4271637IncompleteBC020931acyl-Coenzyme A dehydrogenase, short/branched chain
4799548IncompleteBC045723acyl-Coenzyme A dehydrogenase, short/branched chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001600  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001609 NP_001600 P45954 EC 1.3.8.5 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U12778 AAA74424 P45954 EC 1.3.8.5
BC013756 AAH13756 P45954 EC 1.3.8.5
HQ447278 ADQ31765    
AK314241 BAG36909 P45954 EC 1.3.8.5
AK298638 BAG60813 B4DQ51  
AL831821 CAD38535 P45954 EC 1.3.8.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACADSB NP_001600 R.norvegicus Acadsb 25618   NP_037216 84
M.musculus Acadsb 66885 Gene Info NP_080102 83
C.elegans acdh-3 172351   NP_491859 62
D.melanogaster CG3902 40059   NP_649069 62
A.gambiae AgaP_AGAP009783 1279196   XP_318878 60
C.elegans acdh-1 172358   NP_491871 56
N.crassa NCU06543 3878408   XP_962250 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)