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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFRSF11B, tumor necrosis factor receptor superfamily, member 11b
Sequence ID:NM_002546
RefSeqGene ID:NG_012202
Entrez Gene ID:4982
Ensembl ID:ENSG00000164761

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PAGET DISEASE, JUVENILE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 119936612 - 119964060

NM_002546 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
101214119935796119937000
12151439119938732119938956
14401631119940976119941167
16322001119945169119945538
20022354119964030119964382

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4875170Full LengthBC030155tumor necrosis factor receptor superfamily, member 11b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002537  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002546 NP_002537 O00300 TNFR_c6
Death

Related Sequences

 
mRNAGenPeptSwissProt
U94332 AAB53709 O00300
AF134187 AAF20168 O00300
BC030155 AAH30155 O00300
DQ892264 ABM83190  
DQ895466 ABM86392  
AB002146 BAA25910 O00300
AK223155 BAD96875 O00300
AK313710 BAG36455 O00300

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFRSF11B NP_002537 R.norvegicus Tnfrsf11b 25341   NP_037002 87
M.musculus Tnfrsf11b 18383 Gene Info NP_032790 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)