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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAPSN, receptor-associated protein of the synapse
Sequence ID:NM_005055
NM_032645
RefSeqGene ID:NG_008312
Entrez Gene ID:5913
Ensembl ID:ENSG00000165917

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
FETAL AKINESIADEFORMATION SEQUENCEDOK7
DOK7
MYASTHENIC SYNDROME, CONGENITAL, ASSOCIATED WITH ACETYLCHOLINE RECEPTOR DEFICIENCYCHRNB1
CHRNE
MUSK

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 47459307 - 47470730

 Exon Info From UCSC:
NM_005055
NM_032645

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3530551Full LengthBC004196receptor-associated protein of the synapse

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005046  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005055 NP_005046 Q13702 TPR_1
NM_032645 NP_116034    

Related Sequences

 
mRNAGenPeptSwissProt
BC004196 AAH04196 Q13702
AF449218 AAL86639 Q13702
Z33905 CAA83954 Q13702

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAPSN NP_005046 R.norvegicus Rapsn 362161   NP_001102054 97
M.musculus Rapsn 19400 Gene Info NP_033049 96
C.elegans rpy-1 174105   NP_495365 33
D.melanogaster CG1909 43800   NP_651928 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta