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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMCHD1, structural maintenance of chromosomes flexible hinge domain containing 1
Sequence ID:NM_015295
RefSeqGene ID:NG_031972
Entrez Gene ID:23347
Ensembl ID:ENSG00000101596

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18p11.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 2739473 - 2805009

 Exon Info From UCSC:
NM_015295

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015295 NP_056110 A6NHR9  

Related Sequences

 
mRNAGenPeptSwissProt
AB014550 BAA31625 A6NHR9
AK025646 BAB15202 A6NHR9
AK126324 BAC86525 A6NHR9
AL080138 CAB45732 A6NHR9
CR627458 CAH10538 A6NHR9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMCHD1 NP_056110 R.norvegicus Smchd1 316732   XP_244261 88
M.musculus Smchd1 74355 Gene Info NP_083163 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)