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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIM1, pim-1 oncogene
Sequence ID:NM_001243186
NM_002648
RefSeqGene ID:NG_029601
Entrez Gene ID:5292
Ensembl ID:ENSG00000137193

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 37138363 - 37142150

Transcript StartTranscript EndChromosomal Start Chromosomal End
15123713792137138432
5136193713854837138654
6206703713875637138806
67110373713890037139266
103812143714077137140947
121527073714170937143201

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4591723Full LengthBC020224pim-1 oncogene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002639  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001243186 NP_001230115 P11309 EC 2.7.11.1  
NM_002648 NP_002639     Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M54915 AAA36447 P11309 EC 2.7.11.1
M16750 AAA60089 P11309 EC 2.7.11.1
M24779 AAA81553 P11309 EC 2.7.11.1
BC020224 AAH20224 P11309 EC 2.7.11.1
DQ022562 AAY87461 P11309 EC 2.7.11.1
AK301158 BAG62748 B4DVN6  
AK301314 BAG62865 B4DW03  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIM1 NP_002639 R.norvegicus Pim1 24649   NP_058730 97
M.musculus Pim1 18712 Gene Info NP_032868 94
C.elegans prk-2 175437   NP_497696 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)