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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. USP21, ubiquitin specific peptidase 21
Sequence ID:NM_001014443
NM_012475
Entrez Gene ID:27005
Ensembl ID:ENSG00000143258

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 161129402 - 161135320

 Exon Info From UCSC:
NM_001014443
NM_012475

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3877298Full LengthBC090946ubiquitin specific peptidase 21
9020278Full LengthBC136291ubiquitin specific peptidase 21
2958151IncompleteBC003130ubiquitin specific peptidase 21

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036607  NP_001014443  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001014443 NP_001014443 Q9UK80 EC 3.4.19.12 UCH
NM_012475 NP_036607 Q9UK80 EC 3.4.19.12 UCH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF177758 AAD54321 Q9UK80 EC 3.4.19.12
AF233442 AAF61308 Q9UK80 EC 3.4.19.12
AF217979 AAG17222 Q9UK80 EC 3.4.19.12
BC003130 AAH03130 Q9UK80 EC 3.4.19.12
BC090946 AAH90946 Q9UK80 EC 3.4.19.12
BC136291 AAI36292 Q9UK80 EC 3.4.19.12
AB208899 BAD92136 Q9UK80 EC 3.4.19.12
AK292319 BAF85008 Q9UK80 EC 3.4.19.12
AL157417 CAB75649 Q9NSS9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens USP21 NP_001014443 R.norvegicus Usp21 688466   NP_001121110 97
M.musculus Usp21 30941 Gene Info NP_038947 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)