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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNX15, Sorting nexin 15
Sequence ID:NM_013306
NM_147777
RefSeqGene ID:NG_029947
Entrez Gene ID:29907
Ensembl ID:ENSG00000110025

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64794961 - 64808044

 Exon Info From UCSC:
NM_013306
NM_147777

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3510379Full LengthBC009897sorting nexin 15
3678551Full LengthBC012767sorting nexin 15
3678576Full LengthBC014520sorting nexin 15

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037438  NP_680086  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013306 NP_037438 Q9NRS6 PX
MIT
NM_147777 NP_680086   PX
MIT

Related Sequences

 
mRNAGenPeptSwissProt
AF001435 AAB81205 O14612
AF175267 AAF89955 Q9NRS6
AF175268 AAF89956 Q9NRS6
BC009897 AAH09897 Q9NRS6
BC012767 AAH12767 Q9NRS6
BC014520 AAH14520 Q9NRS6
BT006631 AAP35277 Q9NRS6
AB209439 BAD92676 Q59FM1
AK315642 BAG38009 B2RDR2
AK096447 BAG53293 B3KU31

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNX15 NP_037438 M.musculus Snx15 69024 Gene Info NP_081188 88
R.norvegicus Snx15 293691   NP_001019923 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)