Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KALRN, kalirin, RhoGEF kinase
Sequence ID:NM_001024660
NM_003947
NM_007064
NR_028136
RefSeqGene ID:NG_012742
Entrez Gene ID:8997
Ensembl ID:ENSG00000160145

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CORONARY HEART DISEASE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 124303551 - 124439662

 Exon Info From UCSC:
NM_001024660
NM_003947
NM_007064

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066431Full LengthBC166705kalirin, RhoGEF kinase
4469692IncompleteBC026865kalirin, RhoGEF kinase
5284350IncompleteBC037924kalirin, RhoGEF kinase
6497653IncompleteBC058015kalirin, RhoGEF kinase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003938  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001024660 NP_001019831      
NM_003947 NP_003938 O60229 EC 2.7.11.1 PH
Spectrin
RhoGEF
NM_007064 NP_008995      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U94190 AAC15791 O60229 EC 2.7.11.1
BC026865 AAH26865 O60229 EC 2.7.11.1
BC058015 AAH58015 O60229 EC 2.7.11.1
BC166705 AAI66705    
AB011422 BAA76314 O60229 EC 2.7.11.1
AK125979 BAC86373 O60229 EC 2.7.11.1
AK131379 BAD18530 O60229 EC 2.7.11.1
AK296657 BAG59254 B4DKP2  
AL137629 CAB70850 O60229 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KALRN NP_001019831 R.norvegicus Kalrn 84009   NP_114451 98
M.musculus Kalrn 545156 Gene Info NP_796331 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)