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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPA2, replication protein A2, 32kDa
Sequence ID:NM_002946
Entrez Gene ID:6118
Ensembl ID:ENSG00000117748

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 28218112 - 28241086

NM_002946 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
227312821804828218757
7328262822052228220616
8279342822080028220907
93510512822351528223631
105211262822414328224217
112712402823343828233551
124113422823369128233792
134314492824057328240679
145017412824094428241235

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538351Full LengthBC001630replication protein A2, 32kDa
4111194Full LengthBC021257replication protein A2, 32kDa
4563651Full LengthBC012157replication protein A2, 32kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002937  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002946 NP_002937 P15927 tRNA_anti

Related Sequences

 
mRNAGenPeptSwissProt
J05249 AAA36560 P15927
BC001630 AAH01630 P15927
BC012157 AAH12157 P15927
BC021257 AAH21257 P15927
DQ892352 ABM83278  
DQ895821 ABM86747  
AK312956 BAG35795 B2R7E8
AK298759 BAG60901 B4DQD9
AK300691 BAG62374 B4DUL2
CR450348 CAG29344 P15927

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPA2 NP_002937 M.musculus Rpa2 19891 Gene Info NP_035414 89
R.norvegicus Rpa2 59102   NP_067593 89
N.crassa NCU07717 3878115   XP_961967 38
S.pombe ssb2 2538781   NP_588227 35
A.thaliana RPA2 816985   NP_565571 33
D.melanogaster RPA2 35364   NP_610077 33
A.thaliana RPA32B 821187   NP_566188 32
A.gambiae AgaP_AGAP008332 1277651   XP_317127 31
S.cerevisiae RFA2 855404   NP_014087 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)