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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PSMC5, proteasome (prosome, macropain) 26S subunit, ATPase, 5
Sequence ID:NM_001199163
NM_002805
Entrez Gene ID:5705
Ensembl ID:ENSG00000087191

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 61905080 - 61909378


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820259Full LengthBC001932proteasome (prosome, macropain) 26S subunit, ATPase, 5
2821416Full LengthBC002367proteasome (prosome, macropain) 26S subunit, ATPase, 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002796  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199163 NP_001186092    
NM_002805 NP_002796 P62195 AAA

Related Sequences

 
mRNAGenPeptSwissProt
AF035309 AAB88187 P62195
L38810 AAC41735 P62195
BC001932 AAH01932 P62195
BC002367 AAH02367 P62195
DQ892196 ABM83122  
DQ895391 ABM86317  
D44467 BAA07919 P62195
AK290758 BAF83447 A8K3Z3
AK291878 BAF84567 P62195

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMC5 NP_002796 M.musculus Psmc5 19184 Gene Info NP_032976 100
R.norvegicus Psmc5 81827   NP_112411 100
A.gambiae AgaP_AGAP007243 1269903   XP_308557 95
D.melanogaster Pros45 33105   NP_608447 93
C.elegans rpt-6 176661   NP_499609 85
C.elegans F56F11.4 175403   NP_741098 82
S.pombe rpt6 2540487   NP_595870 80
N.crassa NCU05363 3879494   XP_963354 79
S.cerevisiae RPT6 852834   NP_011467 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)