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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. QARS, glutaminyl-tRNA synthetase
Sequence ID:NM_005051
Entrez Gene ID:5859
Ensembl ID:ENSG00000172053

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49133366 - 49140821

 Exon Info From UCSC:
NM_005051

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821788Full LengthBC000394glutaminyl-tRNA synthetase
3452261Full LengthBC001567glutaminyl-tRNA synthetase
3857444Full LengthBC029739glutaminyl-tRNA synthetase
3543728IncompleteBC001772glutaminyl-tRNA synthetase
3925061IncompleteBC016634glutaminyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005042  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005051 NP_005042 P47897 EC 6.1.1.18 tRNA-synt_1c
tRNA-synt_1c_C
tRNA_synt_1c_R2
tRNA_synt_1c_R1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF130067 AAG35495 Q9H3A5  
BC000394 AAH00394 P47897 EC 6.1.1.18
BC001567 AAH01567 P47897 EC 6.1.1.18
BC001772 AAH01772 Q9BUZ3  
BC016634 AAH16634 Q96AW5  
BC029739 AAH29739 P47897 EC 6.1.1.18
JF432294 ADZ15511    
AK222510 BAD96230 Q53HS0  
AK290523 BAF83212 A8K3A8  
AK293260 BAG56792 B4DDN1  
AK297987 BAG60295 B4DNN3  
AK300220 BAG61988 B4DTH6  
AK301559 BAG63054 B4DWJ2  
AK302867 BAH13826 B7Z840  
X76013 CAA53600 P47897 EC 6.1.1.18

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens QARS NP_005042 R.norvegicus Qars 290868   NP_001007625 93
M.musculus Qars 97541 Gene Info NP_598555 90
C.elegans ers-1 178415   NP_502812 58
D.melanogaster Aats-gln 45786   NP_524841 58
A.gambiae AgaP_AGAP010267 1279691   XP_319458 56
N.crassa NCU07926 3878574   XP_962442 49
S.pombe qrs1 2540978   NP_596745 47
A.thaliana OVA9 839120   NP_001185094 43
S.cerevisiae GLN4 854339   NP_014811 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)