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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRIM23, tripartite motif containing 23
Sequence ID:NM_001656
NM_033227
NM_033228
Entrez Gene ID:373
Ensembl ID:ENSG00000113595

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q12.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 64886004 - 64920123

 Exon Info From UCSC:
NM_001656
NM_033227
NM_033228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4811707Full LengthBC022510tripartite motif-containing 23

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001647  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001656 NP_001647 P36406 Arf
zf-B_box
NM_033227 NP_150230    
NM_033228 NP_150231    

Related Sequences

 
mRNAGenPeptSwissProt
L04510 AAA35940 P36406
AF230397 AAG50176 P36406
AF230398 AAG50177 P36406
AF230399 AAG50178 P36406
BC022510 AAH22510 P36406
DQ893646 ABM84572  
DQ895584 ABM86510  
AK292814 BAF85503 A8K9U9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM23 NP_001647 M.musculus Trim23 81003 Gene Info NP_109656 98
R.norvegicus Trim23 81002   XP_342184 98
C.elegans arc-1 174525   NP_496089 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)