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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. NCL, nucleolin
Sequence ID:NM_005381
Entrez Gene ID:4691
Ensembl ID:ENSG00000115053

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 232319616 - 232329163

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2960982Full LengthBC002343nucleolin
2960982Full LengthBC006494nucleolin
2960982Full LengthBC006516nucleolin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005372  

Protein Infomation

NM_005381 NP_005372 P19338 RRM_1

Related Sequences

BC002343 AAH02343 Q9BQ02
BC006494 AAH06494 Q9BQ02
BC006516 AAH06516 Q9BQ02
AK091742 BAC03738 P19338
AK127608 BAC87055 Q6ZS99
AK001314 BAG50892 B3KM80
AK095897 BAG53161 B3KTP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens NCL NP_005372 R.norvegicus Ncl 25135   NP_036881 86
M.musculus Ncl 17975 Gene Info NP_035010 85
A.thaliana NUC-L1 841314   NP_175322 38
N.crassa NCU03092 3880011   XP_963862 36
S.cerevisiae NSR1 853064   NP_011675 35
A.thaliana NUC-L2 821392   NP_188491 32
S.pombe gar2 2542869   NP_593531 31
P.falciparum PF13_0165 814135   XP_001350041 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta