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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPP1CC, protein phosphatase 1, catalytic subunit, gamma isozyme
Sequence ID:NM_001244974
NM_002710
RefSeqGene ID:NG_030325
Entrez Gene ID:5501
Ensembl ID:ENSG00000186298

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.1-q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 111157616 - 111159848

Transcript StartTranscript EndChromosomal Start Chromosomal End
11356111157614111158969
13571491111159939111160073
14921715111160276111160499
17161820111162464111162568
18212051111168333111168563
20522183111169574111169705
21842483111180457111180756

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3956353Full LengthBC014073protein phosphatase 1, catalytic subunit, gamma isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002701  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001244974 NP_001231903      
NM_002710 NP_002701 P36873 EC 3.1.3.16 Metallophos

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L07395 AAA19823 P36873 EC 3.1.3.16
BC014073 AAH14073 P36873 EC 3.1.3.16
EU832086 ACE86748    
EU831993 ACE87434    
JF432841 ADZ16058    
AK297882 BAG60205 B4DNE3  
X74008 CAA52169 P36873 EC 3.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP1CC NP_002701 M.musculus Ppp1cc 19047 Gene Info NP_038664 100
R.norvegicus Ppp1cc 24669   NP_071943 100
D.melanogaster Pp1-87B 49260   NP_524937 93
D.melanogaster Pp1-13C 48531   NP_524921 92
P.falciparum PP1 811723   XP_001348315 86
S.pombe sds21 2539179   NP_587898 81
A.thaliana TOPP4 818571   NP_181514 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)