Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CX3CR1, chemokine (C-X3-C motif) receptor 1
Sequence ID:NM_001171171
NM_001171172
NM_001171174
NM_001337
RefSeqGene ID:NG_016362
Entrez Gene ID:1524
Ensembl ID:ENSG00000168329

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AGE-RELATED MACULOPATHYAPOE
C2
CFB
CFHR1
CFHR3
HMCN1
PLEKHA1
PLEKHA1
TLR3
AIDS, RAPID PROGRESSION TOCCL11
CCL2
CCL3
CCL3L1
CD209
CXCL12
CXCR1
HLA-C
HLA-C
HLA-C
IFNG
IL10
IL4R
IL4R
KIR3DL1

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 39304986 - 39321525

 Exon Info From UCSC:
NM_001171171
NM_001171172
NM_001171174
NM_001337

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5216452Full LengthBC028078chemokine (C-X3-C motif) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001328  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001171171 NP_001164642    
NM_001171172 NP_001164643    
NM_001171174 NP_001164645    
NM_001337 NP_001328 P49238 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U28934 AAA87032 P49238
U20350 AAA91783 P49238
BC028078 AAH28078 P49238
DQ891063 ABM81989  
DQ894243 ABM85169  
AK312373 BAG35291 P49238

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CX3CR1 NP_001164645 M.musculus Cx3cr1 13051 Gene Info NP_034117 84
R.norvegicus Cx3cr1 171056   NP_598218 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)