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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CXCL1, chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
Sequence ID:NM_001511
NR_046035
Entrez Gene ID:2919
Ensembl ID:ENSG00000163739

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 74735120 - 74736955

NM_001511 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11797473510874735286
1803037473538574735508
3043877473562274735705
38811037473623774736952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3856841Full LengthBC011976chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001502  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001511 NP_001502 P09341 IL8

Related Sequences

 
mRNAGenPeptSwissProt
J03561 AAA35933 P09341
BC011976 AAH11976 P09341
BT006880 AAP35526 P09341
DQ893591 ABM84517  
DQ894941 ABM85867  
X12510 CAA31027 P09341

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CXCL1 NP_001502 R.norvegicus Cxcl3 171551   NP_612531 59
M.musculus Cxcl3 330122 Gene Info NP_976065 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)