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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLCO2B1, solute carrier organic anion transporter family, member 2B1
Sequence ID:NM_001145211
NM_001145212
NM_007256
RefSeqGene ID:NG_027921
Entrez Gene ID:11309
Ensembl ID:ENSG00000137491

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 74862160 - 74917297

 Exon Info From UCSC:
NM_001145211
NM_001145212
NM_007256

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5752976Full LengthBC041095solute carrier organic anion transporter family, member 2B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009187  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145211 NP_001138683    
NM_001145212 NP_001138684    
NM_007256 NP_009187 O94956 OATP

Related Sequences

 
mRNAGenPeptSwissProt
AF205073 AAG42205 O94956
BC041095 AAH41095 O94956
AB020687 BAA74903 O94956
AB026256 BAA78638 O94956
AK290234 BAF82923 A8K2G9
AK294503 BAG57720 B4DGA9
AK296079 BAG58835 B4DJH3
AK300134 BAG61922 B4DTB0
AK302492 BAG63777 B4DYL5
AK304783 BAG65535 B4E3M3
AL117465 CAB55940 O94956
AL833466 CAH56206 Q658P4
FM209049 CAR64268 C7BWB6
FM209050 CAR64269 C7BWB7
FM209051 CAR64270 C7BWB6
FM209052 CAR64271 C7BWB6
FM209053 CAR64272 C7BWB6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLCO2B1 NP_009187 R.norvegicus Slco2b1 140860   NP_542964 77
M.musculus Slco2b1 101488 Gene Info NP_780525 75
C.elegans F21G4.1 181203   NP_509659 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)