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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSMD8, proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
Sequence ID:NM_002812
Entrez Gene ID:5714
Ensembl ID:ENSG00000099341

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 38865184 - 38874086

NM_002812 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14123886518938865600
4134853886679938866871
4865883886699138867093
5897543886987938870044
7558553887153838871638
8569673887275638872867
96815383887389238874462

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3528096Full LengthBC001164proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
6055235Full LengthBC065006proteasome (prosome, macropain) 26S subunit, non-ATPase, 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002803  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002812 NP_002803 P48556 SAC3_GANP

Related Sequences

 
mRNAGenPeptSwissProt
BC001164 AAH01164 P48556
BC065006 AAH65006 P48556
BT019688 AAV38494 Q5U0B3
D38047 BAA07237 P48556
AK301771 BAG63230 P48556
AK304486 BAG65296 B4E2Y4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMD8 NP_002803 M.musculus Psmd8 57296 Gene Info NP_080821 91
R.norvegicus Psmd8 292766   NP_001094301 91
A.gambiae AgaP_AGAP002606 1273362   XP_312329 54
D.melanogaster Rpn12 39845   NP_648904 51
A.thaliana RPN12a 842760   NP_176633 39
C.elegans rpn-12 174786   NP_496489 38
N.crassa NCU10067 3874029   XP_957882 38
P.falciparum PFC0520w 814438   XP_001351196 37
S.pombe rpn12 2540025   NP_596750 37
S.cerevisiae RPN12 850613   NP_116710 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)