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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP6V1F, ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
Sequence ID:NM_001198909
NM_004231
Entrez Gene ID:9296
Ensembl ID:ENSG00000128524

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 128502911 - 128505632

Transcript StartTranscript EndChromosomal Start Chromosomal End
1219128502897128503115
220691128505430128505901

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171984Full LengthBC107854ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
40032234Full LengthBC104230ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
40032235Full LengthBC104231ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004222  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001198909 NP_001185838    
NM_004231 NP_004222 Q16864 ATP-synt_F

Related Sequences

 
mRNAGenPeptSwissProt
BC104230 AAI04231 Q16864
BC104231 AAI04232 Q16864
BC107854 AAI07855 Q16864
D49400 BAA08392 Q16864
AK312214 BAG35147 A4D1K0
CR456896 CAG33177 Q16864

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)