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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RGN, Regucalcin (senescence marker protein-30)
Sequence ID:NM_152869
NM_004683
Entrez Gene ID:9104
Ensembl ID:ENSG00000130988

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 46940256 - 46952707

 Exon Info From UCSC:
NM_152869
NM_004683

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5760604Full LengthBC050371regucalcin (senescence marker protein-30)
6186669Full LengthBC073173regucalcin (senescence marker protein-30)
5731957IncompleteBC058880regucalcin (senescence marker protein-30)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_690608  NP_004674  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_004683 NP_004674 Q15493 EC 3.1.1.17 SGL
NM_152869 NP_690608 Q15493 EC 3.1.1.17 SGL

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC050371 AAH50371 Q15493 EC 3.1.1.17
BC073173 AAH73173 Q15493 EC 3.1.1.17
D31815 BAA06602 Q15493 EC 3.1.1.17
AB028125 BAA78693 Q15493 EC 3.1.1.17
AB032064 BAA84082 Q15493 EC 3.1.1.17
AK223360 BAD97080 Q15493 EC 3.1.1.17
AK290136 BAF82825 Q15493 EC 3.1.1.17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RGN NP_004674 M.musculus Rgn 19733 Gene Info NP_033086 89
R.norvegicus Rgn 25106   NP_113734 89
D.melanogaster regucalcin 32165   NP_572775 37
D.melanogaster smp-30 41786   NP_731942 36
S.cerevisiae YBR053C 852342   NP_009609 31
N.crassa NCU00326 3873935   XP_957797 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)