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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GGCX, Gamma-glutamyl carboxylase
Sequence ID:NM_000821
NM_001142269
RefSeqGene ID:NG_011811
Entrez Gene ID:2677
Ensembl ID:ENSG00000115486

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 85772073 - 85774076

 Exon Info From UCSC:
NM_000821
NM_001142269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4129593Full LengthBC013979gamma-glutamyl carboxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000812  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000821 NP_000812 P38435 EC 4.1.1.90 VKG_Carbox
NM_001142269 NP_001135741      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M81592 AAA58643 P38435 EC 4.1.1.90
L17128 AAA91834 P38435 EC 4.1.1.90
BC013979 AAH13979 P38435 EC 4.1.1.90
DQ892948 ABM83874    
DQ896196 ABM87195    
EU847509 ACF70731 A7YA96  
AK222827 BAD96547 Q53GV4  
AK313126 BAG35946 A7YA96  
AK297397 BAG59837 B4DMC5  
AK298982 BAG61076 B4DQW4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GGCX NP_000812 M.musculus Ggcx 56316 Gene Info NP_062776 90
R.norvegicus Ggcx 81716   NP_113944 88
A.gambiae AgaP_AGAP006363 1276973   XP_316389 49
D.melanogaster GC 38194   NP_523885 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)