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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CBX1, Chromobox homolog 1
Sequence ID:NM_006807
NM_001127228
Entrez Gene ID:10951
Ensembl ID:ENSG00000108468

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 46148796 - 46178822

 Exon Info From UCSC:
NM_006807
NM_001127228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140815Full LengthBC002609chromobox homolog 1 (HP1 beta homolog Drosophila )
5013102Full LengthBC021302chromobox homolog 1 (HP1 beta homolog Drosophila )

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127228 NP_001120700    
NM_006807 NP_006798 Q6IBN6
P83916
Chromo
Chromo_shadow

Related Sequences

 
mRNAGenPeptSwissProt
U35451 AAB81548 Q6IBN6
P83916
BC002609 AAH02609 Q6IBN6
P83916
BC021302 AAH21302 Q6IBN6
P83916
EU446771 ABZ92300  
AK312615 BAG35502 Q6IBN6
CR456766 CAG33047 Q6IBN6
P83916

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CBX1 NP_001120700 M.musculus Cbx1 12412 Gene Info NP_031648 100
R.norvegicus Cbx1 360609   XP_340886 99
D.melanogaster HP1b 31834   NP_001162713 63
A.gambiae AgaP_AGAP004723 1278505   XP_318105 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)