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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHKA, choline kinase alpha
Sequence ID:NM_001277
NM_212469
Entrez Gene ID:1119
Ensembl ID:ENSG00000110721

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 67820327 - 67823163

 Exon Info From UCSC:
NM_001277
NM_212469

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5265994Full LengthBC036471choline kinase alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001268  NP_997634  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001277 NP_001268 P35790 EC 2.7.1.32
EC 2.7.1.82
Choline_kinase
APH
NM_212469 NP_997634     Choline_kinase
APH

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC036471 AAH36471 P35790 EC 2.7.1.32
EC 2.7.1.82
D10704 BAA01547 P35790 EC 2.7.1.32
EC 2.7.1.82

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHKA NP_001268 R.norvegicus Chka 29194   NP_058823 90
M.musculus Chka 12660 Gene Info NP_038518 88
P.falciparum PF14_0020 811591   XP_001348193 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)