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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H1C, Histone cluster 1, H1c
Sequence ID:NM_005319
Entrez Gene ID:3006
Ensembl ID:ENSG00000187837

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26056015 - 26056656

NM_005319 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27322605596826056698

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005310  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005319 NP_005310 P16403 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
EU446960 ABZ92489  
EU832181 ACE86751  
EU832089 ACE87439  
AK290947 BAF83636 P16403
AB451259 BAG70073 P16403
AB451385 BAG70199 P16403

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H1C NP_005310 M.musculus Hist1h1c 50708 Gene Info NP_056601 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)