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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALDH1A1, aldehyde dehydrogenase 1 family, member A1
Sequence ID:NM_000689
RefSeqGene ID:NG_012249
Entrez Gene ID:216
Ensembl ID:ENSG00000165092

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q21.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 75515587 - 75567959

 Exon Info From UCSC:
NM_000689

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988388Full LengthBC001505aldehyde dehydrogenase 1 family, member A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000680  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000689 NP_000680 P00352 EC 1.2.1.36 Aldedh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M26761 AAA35518 P00352 EC 1.2.1.36
K03000 AAA51695 P00352 EC 1.2.1.36
AF003341 AAC51652 P00352 EC 1.2.1.36
BC001505 AAH01505 P00352 EC 1.2.1.36
BT006921 AAP35567 P00352 EC 1.2.1.36
AY390731 AAR92229 P00352 EC 1.2.1.36
DQ890669 ABM81595    
DQ893850 ABM84776    
AB209821 BAD93058 Q59EJ0  
AK293176 BAG56719 B4DDF8  
AK302168 BAG63535 B4DXX3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALDH1A1 NP_000680 M.musculus Aldh1a1 11668 Gene Info NP_038495 87
R.norvegicus Aldh1a1 24188   NP_071852 86
A.gambiae AgaP_AGAP003578 1274242   XP_313331 59
D.melanogaster CG31075 43244   NP_733183 59
S.pombe SPAC9E9.09c 2542976   NP_594582 54
N.crassa NCU03415 3873009   XP_956862 54
A.thaliana ALDH2C4 822042   NP_566749 52
S.cerevisiae ALD5 856804   NP_010996 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)