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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDH5, cadherin 5, type 2 (vascular endothelium)
Sequence ID:NM_001795
NM_001114117
Entrez Gene ID:1003
Ensembl ID:ENSG00000179776

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 66400615 - 66437629


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40012042Full LengthBC096363cadherin 5, type 2 (vascular endothelium)
40012045Full LengthBC096364cadherin 5, type 2 (vascular endothelium)
40012047Full LengthBC096365cadherin 5, type 2 (vascular endothelium)
40012053Full LengthBC117520cadherin 5, type 2 (vascular endothelium)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001786  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001795 NP_001786 P33151 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
U84722 AAB41796 P33151
BC096363 AAH96363 Q4VAI6
BC096364 AAH96364 Q4VAI5
BC096365 AAH96365 Q4VAI4
BC117520 AAI17521 Q4VAI6
AB035304 BAA87418 P33151
AB209908 BAD93145 Q59EA3
AK300299 BAG62052 B4DTP0
AK300322 BAG62074 B4DTR2
AK300461 BAG62180 B4DU18
X59796 CAA42468 P33151
X79981 CAA56306 P33151

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH5 NP_001786 R.norvegicus Cdh5 307618   NP_001100877 77
M.musculus Cdh5 12562 Gene Info NP_033998 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)