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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMAN2, Lectin, mannose-binding 2
Sequence ID:NM_006816
Entrez Gene ID:10960
Ensembl ID:ENSG00000169223

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 176743806 - 176758591

NM_006816 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
23706176758563176759246
707826176761284176761403
827941176764136176764250
9421103176764363176764524
11041183176764706176764785
11841301176765488176765605
13021420176778173176778291
14211853176778452176778884

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4135210Full LengthBC017263lectin, mannose-binding 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006807  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006816 NP_006807 Q12907 Lectin_leg-like

Related Sequences

 
mRNAGenPeptSwissProt
U10362 AAA19572 Q12907
BC017263 AAH17263 Q12907
JF432530 ADZ15747  
AK222609 BAD96329 Q12907
AK292099 BAF84788 A8K7T4
AK301607 BAG63093 B4DWN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMAN2 NP_006807 M.musculus Lman2 66890 Gene Info NP_080104 95
R.norvegicus Lman2 290994   NP_001108496 94
A.gambiae AgaP_AGAP004407 1274552   XP_313693 56
D.melanogaster CG5510 42872   NP_651224 50
C.elegans ile-2 180423   NP_508151 46
N.crassa NCU06242 3879248   XP_963093 40
S.pombe SPCC126.08c 2538834   NP_588451 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)