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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SYVN1, synovial apoptosis inhibitor 1, synoviolin
Sequence ID:NM_032431
RefSeqGene ID:NG_029713
Entrez Gene ID:84447
Ensembl ID:ENSG00000162298

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64895853 - 64901072

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5211742Full LengthBC030530synovial apoptosis inhibitor 1, synoviolin
100002344BC141662synovial apoptosis inhibitor 1, synoviolin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115807  NP_757385  

Protein Infomation

NM_032431 NP_115807   zf-C3HC4
NM_172230 NP_757385 Q86TM6 zf-C3HC4

Related Sequences

BC030530 AAH30530 Q86TM6
BC141662 AAI41663  
AF317634 AAL26903 Q86TM6
EU176586 ABW03387  
EU176276 ABW03727  
EU446616 ABZ92145  
AB058713 BAB47439 Q86TM6
AK074148 BAB84974 Q8TEH6
AB085847 BAC24801 Q86TM6
AK126912 BAG54394 B3KX82
AL834262 CAD38937 Q86TM6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SYVN1 NP_757385 M.musculus Syvn1 74126 Gene Info NP_083045 96
R.norvegicus Syvn1 361712   NP_001094209 96
A.gambiae AgaP_AGAP003179 1273849   XP_312875 56
D.melanogaster sip3 43747   NP_651894 52
C.elegans hrd-1 179612   NP_505969 45
A.thaliana AT3G16090 820854   NP_188230 45
A.thaliana AT1G65040 842812   NP_849843 42
N.crassa NCU04633 3875339   XP_959176 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)