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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCK2, phosphoenolpyruvate carboxykinase 2 (mitochondrial)
Sequence ID:NM_001018073
NM_004563
RefSeqGene ID:NG_008162
Entrez Gene ID:5106
Ensembl ID:ENSG00000100889

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 24563521 - 24573337

 Exon Info From UCSC:
NM_001018073
NM_004563

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138368Full LengthBC001454phosphoenolpyruvate carboxykinase 2 (mitochondrial)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001018083  NP_004554  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001018073 NP_001018083     PEPCK
NM_004563 NP_004554 Q16822 EC 4.1.1.32 PEPCK

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001454 AAH01454 Q16822 EC 4.1.1.32
AK301400 BAG62935 B4DW73  
AK316206 BAH14577 B4DW73  
X92720 CAA63380 Q16822 EC 4.1.1.32
BX248272 CAD62600 Q16822 EC 4.1.1.32
CR456913 CAG33194 Q6IB91  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCK2 NP_004554 M.musculus Pck2 74551 Gene Info NP_083270 92
R.norvegicus Pck2 361042   NP_001101847 92
A.gambiae AgaP_AGAP003350 1275028   XP_314250 67
D.melanogaster Pepck 37131   NP_523784 64
C.elegans R11A5.4 172556   NP_001021587 59
C.elegans W05G11.6 175171   NP_497134 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)