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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL4, chemokine (C-C motif) ligand 4
Sequence ID:NM_002984
Entrez Gene ID:6351
Ensembl ID:ENSG00000129277

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34431287 - 34432797

NM_002984 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11553443121934431373
1562703443192034432034
2716673443261734433013

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6727378Full LengthBC107433chemokine (C-C motif) ligand 4
40032168Full LengthBC104226chemokine (C-C motif) ligand 4
40032172Full LengthBC104227chemokine (C-C motif) ligand 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002975  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002984 NP_002975 P13236 IL8

Related Sequences

 
mRNAGenPeptSwissProt
M23502 AAA36656 P13236
M57503 AAA36752 P13236
J04130 AAA51576 P13236
M25316 AAA57256 P13236
BC104226 AAI04227 P13236
BC104227 AAI04228 P13236
BC107433 AAI07434 P13236
AY312578 AAR16183 Q6JSE0
AY766446 AAX07305 P13236
AY766448 AAX07307 Q7M4M2
X16166 CAA34291 P13236
X53683 CAA37723 P13236
CR542119 CAG46916 P13236

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL4 NP_002975 R.norvegicus Ccl4 116637   NP_446310 77
M.musculus Ccl4 20303 Gene Info NP_038680 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta