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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. APOC2, apolipoprotein C-II
Sequence ID:NM_000483
RefSeqGene ID:NG_008837
Entrez Gene ID:344
Ensembl ID:ENSG00000224916

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPERLIPOPROTEINEMIA, TYPE IB 

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 45452427 - 45452652

NM_000483 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1904544924245449331
911584545172245451789
1593184545195745452116
3197204545241545452816

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3935036Full LengthBC005348apolipoprotein C-II
6165425Full LengthBC065270apolipoprotein C-II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000474  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000483 NP_000474 P02655 Apo-CII

Related Sequences

 
mRNAGenPeptSwissProt
M29844 AAA51743 P02655
AF113884 AAD28193 P02655
BC005348 AAH05348 P02655
BC065270 AAH65270 Q6P163
BT006708 AAP35354 P02655
EU832732 ACE87064  
EU832654 ACE87745  
X00568 CAA25234 P02655

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens APOC2 NP_000474 R.norvegicus Apoc2 292697   NP_001078821 66
M.musculus Apoc2 11813 Gene Info NP_033825 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)