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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NAGA, N-acetylgalactosaminidase, alpha-
Sequence ID:NM_000262
RefSeqGene ID:NG_009247
Entrez Gene ID:4668
Ensembl ID:ENSG00000198951

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
KANZAKI DISEASE 
SCHINDLER DISEASE, TYPE I 

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 42455767 - 42466382

NM_000262 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
220804245433842456416
208122244245692742457070
222524224245883042459027
242325844246174142461902
258526794246271342462807
268028574246311642463293
285830294246376842463939
303031654246444242464577
316637264246628542466845

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504221Full LengthBC000095N-acetylgalactosaminidase, alpha-

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000253  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000262 NP_000253 P17050 EC 3.2.1.49 Melibiase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M38083 AAA36351 P17050 EC 3.2.1.49
M62783 AAA51677 P17050 EC 3.2.1.49
M29276 AAA59902 P17050 EC 3.2.1.49
BC000095 AAH00095 P17050 EC 3.2.1.49
DQ891874 ABM82800    
DQ895062 ABM85988    
CR456527 CAG30413 P17050 EC 3.2.1.49
CU013127 CAK54558    
CU013415 CAK54857    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NAGA NP_000253 M.musculus Naga 17939 Gene Info NP_032695 83
R.norvegicus Naga 315165   NP_001012120 83
A.gambiae AgaP_AGAP005846 1276513   XP_315871 48
D.melanogaster CG7997 36829   NP_611119 48
A.thaliana AT3G56310 824798   NP_191190 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)