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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSME1, proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
Sequence ID:NM_006263
NM_176783
Entrez Gene ID:5720
Ensembl ID:ENSG00000092010

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 24605383 - 24606377

 Exon Info From UCSC:
NM_006263
NM_176783

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961448Full LengthBC000352proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
2961448Full LengthBC007503proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_788955  NP_006254  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006263 NP_006254 Q06323 PA28_alpha
PA28_beta
NM_176783 NP_788955   PA28_alpha
PA28_beta

Related Sequences

 
mRNAGenPeptSwissProt
L07633 AAA16521 Q06323
BC000352 AAH00352 Q06323
BC007503 AAH07503 Q06323
BT019337 AAV38144 Q06323
DQ891838 ABM82764  
DQ895024 ABM85950  
AK312211 BAG35144 Q06323
BX248293 CAD62621 Q86SZ9
CR456780 CAG33061 Q06323
CR541658 CAG46459 Q6FHU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSME1 NP_006254 R.norvegicus Psme1 29630   NP_058960 96
M.musculus Psme1 19186 Gene Info NP_035319 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)