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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GATM, glycine amidinotransferase (L-arginine:glycine amidinotransferase)
Sequence ID:NM_001482
RefSeqGene ID:NG_011674
Entrez Gene ID:2628
Ensembl ID:ENSG00000171766

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AGAT DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 45653323 - 45670742

NM_001482 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1911144565332345654418
111512314565609745656213
123212954565699445657057
129614604565824345658407
146115984565856845658705
159917894566026745660457
179019854566152345661718
198622044566879845669016
220526024567058245670979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3010128Full LengthBC004141glycine amidinotransferase (L-arginine:glycine amidinotransferase)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001482 NP_001473 P50440 EC 2.1.4.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S68805 AAB29892 P50440 EC 2.1.4.1
BC004141 AAH04141 P50440 EC 2.1.4.1
AK223585 BAD97305 P50440 EC 2.1.4.1
AK294995 BAG58060 P50440 EC 2.1.4.1
AK298350 BAG60595 P50440 EC 2.1.4.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GATM NP_001473 M.musculus Gatm 67092 Gene Info NP_080237 96
R.norvegicus Gatm 81660   NP_112293 96
N.crassa NCU07176 3873576   XP_957401 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)