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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. IRF3, interferon regulatory factor 3
Sequence ID:NM_001197122
NM_001197123
NM_001197124
NM_001197125
NM_001197126
NM_001197127
NM_001197128
NM_001571
NR_045568
RefSeqGene ID:NG_031810
Entrez Gene ID:3661
Ensembl ID:ENSG00000126456

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3-q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 50165795 - 50168095

Transcript StartTranscript EndChromosomal Start Chromosomal End
22635016282850163089
2643795016396950164084
3807605016520450165584
7619535016568150165873
95410245016644450166514
102511965016659950166770
119713695016793050168102
137016145016888750169131

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3347928Full LengthBC000660interferon regulatory factor 3
4135383Full LengthBC009395interferon regulatory factor 3
5494536Full LengthBC071721interferon regulatory factor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001562  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001197122 NP_001184051    
NM_001197123 NP_001184052    
NM_001197124 NP_001184053    
NM_001197125 NP_001184054    
NM_001197126 NP_001184055    
NM_001197127 NP_001184056    
NM_001197128 NP_001184057    
NM_001571 NP_001562 Q14653 IRF

Related Sequences

 
mRNAGenPeptSwissProt
BC000660 AAH00660 Q7Z5G6
BC009395 AAH09395 Q96GL3
BC071721 AAH71721 Q14653
DQ893455 ABM84381  
DQ896306 ABM87305  
HM357932 ADN86147 E2GIM5
HM357933 ADN86148 E2GIM6
HM357934 ADN86149 E2GIM7
HM357935 ADN86150 E2GIM8
HM357936 ADN86151 E2GIM9
HM357937 ADN86152 E2GIM7
AB102884 BAD89413 Q5FBY4
AB102886 BAD89415 Q5FBY2
AB102887 BAD89416 Q14653
AK292027 BAF84716 Q14653
AK314421 BAG37040 B2RAZ3
Z56281 CAA91227 Q14653

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IRF3 NP_001562 R.norvegicus Irf3 292892   NP_001006970 75
M.musculus Irf3 54131 Gene Info NP_058545 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta