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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BRD2, bromodomain containing 2
Sequence ID:NM_001113182
NM_001199455
NM_001199456
NM_005104
NR_037625
Entrez Gene ID:6046
Ensembl ID:ENSG00000204256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 32938706 - 32945974

 Exon Info From UCSC:
NM_001113182
NM_005104

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6181728Full LengthBC063840bromodomain containing 2
2961647IncompleteBC000477bromodomain containing 2
4302993IncompleteBC007715bromodomain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005095  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113182 NP_001106653    
NM_001199455 NP_001186384    
NM_001199456 NP_001186385    
NM_005104 NP_005095 P25440 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
M80613 AAA68890 P25440
BC063840 AAH63840 P25440
D42040 BAA07641 P25440
X62083 CAA43996 P25440
BX648109 CAH56171 P25440
BX647233 CAH56179 Q63HQ9
AL832722 CAH56208 Q658Y7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRD2 NP_001106653 R.norvegicus Brd2 294276   NP_997660 97
M.musculus Brd2 14312 Gene Info NP_034368 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)