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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHAF1B, chromatin assembly factor 1, subunit B (p60)
Sequence ID:NM_005441
Entrez Gene ID:8208
Ensembl ID:ENSG00000159259

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 37788672 - 37788988

 Exon Info From UCSC:
NM_005441

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4302243Full LengthBC021218chromatin assembly factor 1, subunit B (p60)
3534467IncompleteBC001143chromatin assembly factor 1, subunit B (p60)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005432  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005441 NP_005432 Q13112 WD40

Related Sequences

 
mRNAGenPeptSwissProt
U20980 AAA76737 Q13112
BC021218 AAH21218 Q13112
JF432525 ADZ15742  
AK313152 BAG35970 B2R7X3
X98262 CAA66915 Q13112

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHAF1B NP_005432 R.norvegicus Chaf1b 288242   NP_001019912 85
M.musculus Chaf1b 110749 Gene Info NP_082359 84
D.melanogaster Caf1-105 36107   NP_610589 44
A.gambiae AgaP_AGAP007544 1269690   XP_308335 43
A.thaliana FAS2 836584   NP_974991 43
N.crassa NCU08357 3881400   XP_965260 41
S.pombe pcf2 2542071   NP_594450 40
S.cerevisiae CAC2 854869   NP_013605 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta