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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC16A1, solute carrier family 16, member 1 (monocarboxylic acid transporter 1)
Sequence ID:NM_001166496
NM_003051
RefSeqGene ID:NG_015880
Entrez Gene ID:6566
Ensembl ID:ENSG00000155380

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 113471942 - 113498804

 Exon Info From UCSC:
NM_001166496
NM_003051

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4811581Full LengthBC026317solute carrier family 16, member 1 (monocarboxylic acid transporter 1)
5298234Full LengthBC045664solute carrier family 16, member 1 (monocarboxylic acid transporter 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003042  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166496 NP_001159968    
NM_003051 NP_003042 P53985 MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
L31801 AAC41707 P53985
BC026317 AAH26317 P53985
BC045664 AAH45664 Q49A45
DQ895286 ABM86212  
EU176206 ABW03657  
EU832043 ACE86705  
EU831949 ACE87390  
AK312500 BAG35402 B2R6A5
AK296688 BAG59282 B4DKS0
AK303603 BAG64618 B4E106
AL162079 CAB82412 P53985

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC16A1 NP_003042 M.musculus Slc16a1 20501 Gene Info NP_033222 88
R.norvegicus Slc16a1 25027   NP_036848 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)