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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NDUFA9, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
Sequence ID:NM_005002
RefSeqGene ID:NG_032124
Entrez Gene ID:4704
Ensembl ID:ENSG00000139180

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
LEIGH SYNDROMEBCS1L
COX15
DLD
FOXRED1
NDUFA10
NDUFA12
NDUFA2
NDUFAF2
NDUFAF6
NDUFS3
NDUFS4
NDUFS7
NDUFS8
NDUFV1
SDHA
SURF1

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 4758273 - 4796399

 Exon Info From UCSC:
NM_005002

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4106931Full LengthBC009311NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
4293690Full LengthBC015837NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
5761015Full LengthBC111546NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
2899948IncompleteBC003351NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004993  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005002 NP_004993 Q16795 Epimerase

Related Sequences

 
mRNAGenPeptSwissProt
L04490 AAA36350 Q16795
AF050641 AAD42055 Q16795
BC003351 AAH03351 Q9BTT5
BC009311 AAH09311 Q16795
BC015837 AAH15837 Q16795
BC111546 AAI11547 Q16795
HQ447297 ADQ31784  
AK291067 BAF83756 A8K4V2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDUFA9 NP_004993 M.musculus Ndufa9 66108 Gene Info NP_079634 78
R.norvegicus Ndufa9 362440   NP_001094222 76
A.gambiae AgaP_AGAP010792 1278870   XP_318516 50
A.thaliana AT2G20360 816555   NP_565469 50
D.melanogaster CG6020 40272   NP_649234 49
C.elegans Y53G8AL.2 175429   NP_497675 44
N.crassa NCU02373 3875948   XP_959794 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)