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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARFIP2, ADP-ribosylation factor interacting protein 2
Sequence ID:NM_001242854
NM_001242855
NM_001242856
NM_012402
Entrez Gene ID:23647
Ensembl ID:ENSG00000132254

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6496925 - 6502542

Transcript StartTranscript EndChromosomal Start Chromosomal End
19158964969276498497
1590176464989476499121
1765192264992706499427
1923214464999676500188
2145226365003696500487
2264236065012016501297
2361246165015526501652
2462259665024606502594

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821666Full LengthBC000392ADP-ribosylation factor interacting protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242854 NP_001229783    
NM_001242855 NP_001229784    
NM_001242856 NP_001229785    
NM_012402 NP_036534 P53365 Arfaptin

Related Sequences

 
mRNAGenPeptSwissProt
U52522 AAA97924 P53365
BC000392 AAH00392 P53365
DQ891967 ABM82893  
DQ895156 ABM86082  
AK300855 BAG62505 B4DUZ3
AK301856 BAG63298 B4DX86
AK301972 BAG63384 B4DXH2
AK304512 BAG65318 P53365
X97567 CAA66179 P53365

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARFIP2 NP_001229783 M.musculus Arfip2 76932 Gene Info NP_084078 99
R.norvegicus Arfip2 293344   NP_001004222 99
A.gambiae AgaP_AGAP004910 1275717   XP_315001 59
D.melanogaster CG17184 41353   NP_650058 51
C.elegans F54C8.7 176326   NP_871661 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta