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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MARCKSL1, MARCKS-like 1
Sequence ID:NM_023009
NR_052852
Entrez Gene ID:65108
Ensembl ID:ENSG00000175130

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 32799439 - 32801823

NM_023009 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
4012973279944032800697
129815843280154732801833

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4138092Full LengthBC007904MARCKS-like 1
5259353Full LengthBC066915MARCKS-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075385  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023009 NP_075385 P49006 MARCKS

Related Sequences

 
mRNAGenPeptSwissProt
BC007904 AAH07904 P49006
BC066915 AAH66915 P49006
DQ893237 ABM84163  
DQ896567 ABM87566  
X70326 CAA49793 P49006
AL713653 CAD28462 P49006
AM393505 CAL38382  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MARCKSL1 NP_075385 M.musculus Marcksl1 17357 Gene Info NP_034937 96
R.norvegicus Marcksl1 81520   NP_110489 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)