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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HLX, H2.0-like homeobox
Sequence ID:NM_021958
Entrez Gene ID:3142
Ensembl ID:ENSG00000136630

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 221052742 - 221058395

NM_021958 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11049221052742221053790
10501229221054535221054714
12301414221055505221055689
14152276221057536221058397

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3349581Full LengthBC007294H2.0-like homeobox
5184776Full LengthBC033808H2.0-like homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068777  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021958 NP_068777 Q14774 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC007294 AAH07294 Q14774
BC033808 AAH33808 Q14774
DQ893305 ABM84231  
DQ896761 ABM87760  
AB208812 BAD92049 Q14774
AK313298 BAG36105 Q14774
AK127923 BAG54598 B3KXT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HLX NP_068777 M.musculus Hlx 15284 Gene Info NP_032276 89
R.norvegicus Hlx 364069   NP_001071142 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)